Browse of TCMCG002C02300 protein

CDS

Accession Number	TCMCG002C02300
gbkey	CDS
Protein Id	XP_020089242.1
Location	join(23537797..23537978,23538529..23538794,23539486..23539658,23539782..23539998,23540772..23541118,23541778..23541957,23542283..23542421,23542506..23542654,23543288..23543399,23543506..23544116,23544198..23544321,23544431..23544711,23545178..23545294,23545412..23545474,23546194..23546385,23547011..23547070,23547147..23547215,23547455..23547601,23547696..23547815,23547971..23548090,23548224..23548379,23548457..23548519,23548626..23548729,23549584..23549989,23550315..23550417,23550507..23550637,23550820..23550891,23551089..23551170,23551550..23551657,23551753..23551894,23552080..23552169,23552261..23552492,23552591..23552645,23552712..23552803,23552888..23552948,23553120..23553466)
Gene	LOC109710858
GeneID	109710858
Organism	Ananas comosus

Protein

Length	1970aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA371634
db_source	XM_020233653.1
Definition	nuclear pore complex protein GP210 isoform X2 [Ananas comosus]

EGGNOG-MAPPER Annotation

COG_category	UY
Description	Nuclear pore membrane glycoprotein
KEGG_TC	1.l.1
KEGG_Module	M00427        [VIEW IN KEGG]
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko00002        [VIEW IN KEGG] ko03019        [VIEW IN KEGG]
KEGG_ko	ko:K14314        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko03013        [VIEW IN KEGG] map03013        [VIEW IN KEGG]
GOs	GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005635        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005783        [VIEW IN EMBL-EBI] GO:0012505        [VIEW IN EMBL-EBI] GO:0031967        [VIEW IN EMBL-EBI] GO:0031975        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGCTCGCCCGGCCGCGGGGCTGCTGCTGGCAGCGGCGGTCATTTTTGCGGCAGCGCTGTCGGCGTCGATCGCGACGACTGCTCCGGGCCCCCACATAGCAGACTTGAACATTCTTCTGCCTCCTCGTATGACGAACCCTGTTGGGTACCGACTGCAGGGAAGCGATGGCTGCTTCTCCTGGTCGTGGGATCATCATGACATTCTATCTGTTCAACCAGAATATAATGTCAGTAGTCGGTGCTCAACTAGTGCTCGGTTAATATCGATTGCTCCTTATAGCGGTCGAAAAGAGACTTCTGTTTATGCTACAGACCTCCACACTGGAGCTACAATACGGTGTAAAGTTTTCATTGATAAGATCTCACGGATCCAAATATTCCATCATGCTGTTAAAATTGATCTAGACGAACTGGCTACACTGCGTATTCGTGGCTTTGATATTGAAGATAATGTATTCTCATCATTGGTAGGCTTACAGTTCTTGTGGAAACTTGTGCCGAAATCTTCTGTAGCAAGCAATATTCATCATCTCGTGCACGTTCCATTGAAGGAAACTCCACTAAGTGATTGTGGTGGTTTTTGTGGTGATCTAGATACACAAATAGAGCTTGAAGATAAAGGTGTGGGTTCAGATTTATATGTTGTGAAAGGAATCGAAATCGGCCATGAGGTTGTTAGTGCCCAATTGCTTGAGCCGCAACTTCAGCATGTGGCAGACACTATCACTTTGACTGTTGCTGAAGCTATGTCACTGGATCCCCCATCACCAGTCTATGTTACTATTGGTGCTTTTGTACACTACAAGCTTAGGATTATTCGTCTAAATACTGTTAAAGTGATTGATTTGCCGTCTCGACATCATCGGTGGTATGTGACAAACTCTTCAGTGGCATGGATAGATGGTGTGATGGGCACCACTCATGCCTTGAATCTTGGATTCACAGATATTATTGTTGAGGATATCAGAGTCTCTGGTCACATACAGACATCTTCCATGCATGTTGTTATCCCACATAAACTTAGCTTATACCTGGTGCCTGTGACGAATGCCTCCATCCCTCTTCAAGGAATAACACCTATTCCCGCATCAAATATTTGGTATGTGTTTCCAGGGCAGGAATACGCAATTAGTGTGAAAGCTTTTGCTGATGAATCTGATGCCAATGAGATACACATCACAGAGAATAATAATTTGAAACTGGAAAGCAGCACAATTGAGTACTGGATTTTATCCCAAGTTTCGCATGATGTTGCCGTCACATGTGACTGGAAGAATTCTAGATTGTTCACCCCCATCTCGGAAGGAAAAGGATTTCTTACAGCCTCTATAACATACCAAAAAGGAAATACATCAGAGGCTGAGGTTCTTAAGCATGTGCAAGAAGTTAACGTGTGCAGAAAAGTGAAGTTAATTATTAATGGACGGAATGAAAGCTCAGATATTATTCGTCTTCCTTGGGCCCCTGGAGTTTTTCAGGAACTTGAGCTAAAGGCAATTGGAGGTTGTGGCAGAACATTTGAAGATTACAGGTGGTTTTCTTCTGATACGGGAGTTATTTACGTCTCTGCTTCTGGCATTATTCGTGCTAAAAGGCCTGGTCGAGCCACTGTCAAAGTGTTTTCAGCTTTTGATTCTATTAACTATGATGAGGTGGTAATTGAAGTTTCAATTCCTTCTTCTATGGTTATCCTGCCAAAGTATCCTGTGGAGGCGATTGTAGGAACTGAACTTCAAGCTGCTGTGACATTAAAAACATCCGATGGAAGCTTCTATAGTAGATGCGATGCTTTTTATTCTTTTGTGAGGTGGAAAGTTTTATCTGAGAATGAATCTTTCAAAATCATCAACATGACAGGGAAGTTGTCAACTTTTAATGCTGTCCAAAGTGCAAAAGGAGTTCAGACCTCACATGCTTATCCTTGTGCATGGACGTACTTAAATGCCACTTGTGCTGGTCGAGCTACAATAGCTGCAACTTTGTCCTTTGAATCACAATCGTCGTTCGAGCCTTTTGATAAACCTATTATTCTGAAAGCATCTTCAACAATATCTGCATATTATCCCCTTTTAGTTTTTCAGGCAGAGACAGGGGATAAGATTGGTGGCTACTGGGTCGACTTAACTAGATTACAAACTGGGCTTCAGGATTTAGATAGCACAGGTTTGGATGAGCTATATCTTGTTCCAGGGTCATCAATGGATATTCTGTTACTTGGAGGGCCCGAGCGTTGGGGCCAAAAGGTTGAATATGTTGAAACTGTCGATGTTCTAGATGAACCTGGTGGATCAATAACCAGTTCTGTTGTTGTTCAAAGCTCACCTTCAGCTAAGGAGAGTCTGTACAGAGTTTCTTGCCAATTAAGGGGGAAATCTAAACTGCTTTTTTCGCGTGGAAATTTGGTTGGCATCGATCATCCAATGCCTGCTGTTGCAAGTGTGCAATTGGTTGTTATCTGCGATTTTCCTTCATCGATCACACTAATTGCTAACGAACCTGCAAACACTCTTGACGCTATACAAACTGCAAACAAAGTTGATCGTGGTGCTAGAAGACTTTGGGCTTCTCCTATCATTGTTTCCAATGGACGTACCATGCGTGTAGCTGCTGTTGGAATCCATGCAACCGAAAGAGCTTTTGCTAACTCATCATCCCTTTGCTTAAGGTGGGAACTTACTGGTTGTGAAGGACTGGCTTATTGGAGTGACATGAATAGTGTTGAAAGATTTGAAGCGGCAATGTGGGAGAGGTTTCTGGTTCTGCTTAATGCTTCAGGACTGTGTACTGTTCGTGCTACAGTGACTGGTTTTTCTCAGACAAATTCTGATCTTTATGAGAAAGCATATTCATTGCATGAAGGTGCAGAAGATGTACTCACAGATGCTTTTAGATTACAGATGGTTTCTTCTTTAAGAGTTATACCAGAGTCCGTTCTGTTGGTTTTTAATCCTGAAGCAAAGGTTAATTTATCAGTTGCTGGTGGGACTTGCTTCCTCAAAGCGGTTATAAATGATACACAAGTGGCTCATATAATTCAGCATCCTGAAAATGTGCTATGTTCGTATTTAATTGTTGGCGTTAAAGGCTTGGGGACTGCTCTATTAACTGTCCACGACATTGGACTTTCTCCTCCAGCTGCTGCTTCTTCTTTGGTTAGAGTTGCAAATATTGATTGGATTAAGTTAATTGCTGAAGAAGAGATAAGCCTTATGGAAGGGGCCACAAGATCTTTTGACATTCTAGCAGGTACACAAGATGGAAATGTCTTTGAGTTTTCACAGTATATGTACATGAACATTGAAGTGCATATTGAGGATGAGGTAATTGTGCTTATCACTGAGAATGATTATTCAAGAGCTGGTGGTTGGGTACTAAATGAACCTAAGTTTTCAATTAGAGCTGCCCATCTTGGAGTTACATCCCTTTATGTTAGTGCAAGACAACAATATGGACGCAAAATTTTAAGCCAAGTTATTAAGGTTGAAGTCTACGAGCCATTACGTGTGCATCCTGATTATATATACCTTGTACCTGCTGCCTCTTATGTGGTTACCTTTAAAGGTGGTCCAAAAGTTGGAGCTTCAGTTGAGTTCATAAGCACGGATGAAGAAATTGCGACTATTCACAAAGAGACAGGAAAGCTTCTCGCCAGTTCCATAGGAAATGCTACGGTTCGTGCTGCAGTTTATGCAAATGGGGGTACTCTTCTCTGTGAAGCCTTTGGAAGAGTTGAAGTTGGGATTCCACCAGCTATGACTTTGAGCACTCAGAGCACCCAGCTTTGTGTTGGTTGTAGTATGCCAATATTTCCATCATTTCCAGAGGGCGACTTATTCTCCTTCTATGAGATTTGTCAAGGTTACTTTTGGACCACAGAGAATGACAAGGTAGTGAATTTCCATGTGAATAAAGAATTACCTTGTGAAGCCAAAGAACTTCCATGCTTTTCCAGTAACAGTGACAAGGGATATATCAACGTACTGATTGGGAGGTCGGCCGGCAAAACAAGAGTTTCTATTTCTGTATCTTGTGATTTTGTTTTAACTGGTGATCCTCAGCGTGTAACCTACAATGCTTCGAAGTCTGTTACCGTGGTAGCAGATCCTCCTCTTGCTCTAGGTTTGCCTATAACTTGGGTGCTCCCGCCGTTTTATACTACTTCAGAGCTTCTTCCTAGATCGCCGGGAATTGGACGGCCGAGCTCTCGTAATAGTGAAAGTTCTATCACTTATTCTTTGCTGAGGTCGTGCGATCAGCATGACCTTCTAAAATCGAAGGCTATCACTATCGACGGAAGTACAATTAAAACAAGCGACAGCAAGAATCTTGCTTGTATCCAAGCAAAAGATCAATCAACTGGAAGAACAGAAATAGCATCCTGTGTAAGGGTTACTGAGGTGACACAAGTAAGGGCTGCTATTGCAGAATCTTCATTCCATGAAGCTTACCTTGCTGTTGGAGATAAAATTGACTTGAGTATCAAGTATTGCGATGTTTTAGGTTATATGTTTTATGAAGCAAAGGGGGTAGTTCCTGTGGATGTTGATACAAATTATCCTAATATTGTGTCTATGATCTTTCCAAAGGATGAAAACAGTACCCATGGTACAAACGAACATGTCATTCTGCAGGCTAGGAGCCCTGGTAGTGCTCTTGTACGGATATCGATCGATCATAATCCGAAGAAGGCAGACTTCATCTTGGTATCCGTTGGTGCTTTAATCTATCCTAGGAATCCAGTCATACATGTTGGACACACTCTTAACTTTACTGTTGTTGGAGATGGCATGGATGGGTTTGAATCAGGTCGGTGGCAGAGTGGTAATGATAGTGTTCTTTCTGTAAATGCAATAACTGGAGAAGTTCATGCTTGTGGTGAAGGGGTAGCTGAAGTCTTCTTCAAAAAGTCGAATATGAAACTGCAAACAACAGTTACTGTGCTGAAAGTGGACCAAATAATTGTTGATGCTCCATCTGAGATCTTGACAAATATTCCATATCCATCTGAAGGTTACAAGTTCCCCATAAGATTTAGTGATTCCATGGAGGGCAAGCATAAGTTTGAAGCAGTTGGAAAACGTGTTGAAGCCTCTTTTGATTGCAAGGTTGCACCACCATTTATTGGCTATGCTAAGCCGTGGAGTGATCATGTTACAAAGAAATCGTATTGTGTTTTCTTTCCGTATTCTCCTAGACAGCTGCTGAGTTTAATGCCAAAGTCAGATGTGAATTTAGAAAAGGACAGTGAAAGTGGAGTAATGTATGTTTCAATAGTTGCGTCGTTGAGAGAAGACCCAAGTGTTATGGGATCTTCACGTGCTCCATTTGTCGGAGGATTTTCAATTGCAGAAGGGAAGCTAAACATAACACCTCACTCCAATAAAAGTGTGTTGACAATCATTGGGAACACGGATGTTGAGATATATTGGAACACCAAGGATCTATTGTCGATAAAACCTCTTAAATCAAGTGGTGCTGGTGTTGGTAGCCGTGTTGAGTACCAGGTTGAAGTCCTTCAAAGACAACCCTTCACGGACAAAATTTATATTGTGCTTCCTGAAACAGGTCAAACTGAGGAAGTAGATGTAAGCTACGAAGCAGGCGAAAGAGAACAACCAGTTCGAGTGACTGGTATCACATGGCCTGCAATCCTAATCTGTGCGTTTGTGTTGGTACTCACAGTCCTCATTTTCCTGAGGTTGCTTGACAAGCCCGAAAGATCCACCGCATCGACTCCCTCGTCAACTGTTGTTACCGGTCCTGCAACACCGCCCCGGATCTCTGCTCCTGTTGACTCTAACTTGTCTCCTCGTACGCCGCAGCCTTTCATAGAGTATGTTAGGAGGACGATCGATGAAACTCCCTACTATAGGCGCGGGGCGAGAAGATACGATCCCCAGTACACCTACTAA

Protein:   MARPAAGLLLAAAVIFAAALSASIATTAPGPHIADLNILLPPRMTNPVGYRLQGSDGCFSWSWDHHDILSVQPEYNVSSRCSTSARLISIAPYSGRKETSVYATDLHTGATIRCKVFIDKISRIQIFHHAVKIDLDELATLRIRGFDIEDNVFSSLVGLQFLWKLVPKSSVASNIHHLVHVPLKETPLSDCGGFCGDLDTQIELEDKGVGSDLYVVKGIEIGHEVVSAQLLEPQLQHVADTITLTVAEAMSLDPPSPVYVTIGAFVHYKLRIIRLNTVKVIDLPSRHHRWYVTNSSVAWIDGVMGTTHALNLGFTDIIVEDIRVSGHIQTSSMHVVIPHKLSLYLVPVTNASIPLQGITPIPASNIWYVFPGQEYAISVKAFADESDANEIHITENNNLKLESSTIEYWILSQVSHDVAVTCDWKNSRLFTPISEGKGFLTASITYQKGNTSEAEVLKHVQEVNVCRKVKLIINGRNESSDIIRLPWAPGVFQELELKAIGGCGRTFEDYRWFSSDTGVIYVSASGIIRAKRPGRATVKVFSAFDSINYDEVVIEVSIPSSMVILPKYPVEAIVGTELQAAVTLKTSDGSFYSRCDAFYSFVRWKVLSENESFKIINMTGKLSTFNAVQSAKGVQTSHAYPCAWTYLNATCAGRATIAATLSFESQSSFEPFDKPIILKASSTISAYYPLLVFQAETGDKIGGYWVDLTRLQTGLQDLDSTGLDELYLVPGSSMDILLLGGPERWGQKVEYVETVDVLDEPGGSITSSVVVQSSPSAKESLYRVSCQLRGKSKLLFSRGNLVGIDHPMPAVASVQLVVICDFPSSITLIANEPANTLDAIQTANKVDRGARRLWASPIIVSNGRTMRVAAVGIHATERAFANSSSLCLRWELTGCEGLAYWSDMNSVERFEAAMWERFLVLLNASGLCTVRATVTGFSQTNSDLYEKAYSLHEGAEDVLTDAFRLQMVSSLRVIPESVLLVFNPEAKVNLSVAGGTCFLKAVINDTQVAHIIQHPENVLCSYLIVGVKGLGTALLTVHDIGLSPPAAASSLVRVANIDWIKLIAEEEISLMEGATRSFDILAGTQDGNVFEFSQYMYMNIEVHIEDEVIVLITENDYSRAGGWVLNEPKFSIRAAHLGVTSLYVSARQQYGRKILSQVIKVEVYEPLRVHPDYIYLVPAASYVVTFKGGPKVGASVEFISTDEEIATIHKETGKLLASSIGNATVRAAVYANGGTLLCEAFGRVEVGIPPAMTLSTQSTQLCVGCSMPIFPSFPEGDLFSFYEICQGYFWTTENDKVVNFHVNKELPCEAKELPCFSSNSDKGYINVLIGRSAGKTRVSISVSCDFVLTGDPQRVTYNASKSVTVVADPPLALGLPITWVLPPFYTTSELLPRSPGIGRPSSRNSESSITYSLLRSCDQHDLLKSKAITIDGSTIKTSDSKNLACIQAKDQSTGRTEIASCVRVTEVTQVRAAIAESSFHEAYLAVGDKIDLSIKYCDVLGYMFYEAKGVVPVDVDTNYPNIVSMIFPKDENSTHGTNEHVILQARSPGSALVRISIDHNPKKADFILVSVGALIYPRNPVIHVGHTLNFTVVGDGMDGFESGRWQSGNDSVLSVNAITGEVHACGEGVAEVFFKKSNMKLQTTVTVLKVDQIIVDAPSEILTNIPYPSEGYKFPIRFSDSMEGKHKFEAVGKRVEASFDCKVAPPFIGYAKPWSDHVTKKSYCVFFPYSPRQLLSLMPKSDVNLEKDSESGVMYVSIVASLREDPSVMGSSRAPFVGGFSIAEGKLNITPHSNKSVLTIIGNTDVEIYWNTKDLLSIKPLKSSGAGVGSRVEYQVEVLQRQPFTDKIYIVLPETGQTEEVDVSYEAGEREQPVRVTGITWPAILICAFVLVLTVLIFLRLLDKPERSTASTPSSTVVTGPATPPRISAPVDSNLSPRTPQPFIEYVRRTIDETPYYRRGARRYDPQYTY